Publications
CTCF and R-loops are boundaries of cohesin-mediated DNA looping
Hongshan Zhang, Zhubing Shi, Edward J. Banigan, Yoori Kim, Hongtao Yu, Xiao-chen Bai, Ilya J. Finkelstein
Molecular Cell, August 2, 2023
Regulation of loop extrusion on the interphase genome
Hyogyung Shin, Yoori Kim*
Critical Reviews in Biochemistry & Molecular Biology, Mar 15, 2023
Fluid-driven DNA stretching for single-molecule studies on chromatin-associated protein
Wonje Heo, Jeonghwan Seo, Yoonhee Lee, Yoori Kim*
Biochemical and Biophysical Research Communications, October 7, 2022
Shaping the 3D genome by the ATPase machine cohesin
Epigenetic cell fate in Candida albicans is controlled by transcription factor condensates acting at super-enhancer-like elements
Human cohesin compacts DNA by loop extrusion
Yoori Kim, Zhubing Shi, Hongshan Zhang, Ilya J. Finkelstein, Hongtao Yu
Science, 366(6471), 1345-1349, December 13, 2019
Intrinsically disordered regions regulate both catalytic and non-catalytic activities of the MutLα mismatch repair complex
Yoori Kim, Christopher M. Furman, Carol M. Manhart, Eric Alani, and Ilya J. Finkelstein
Nucleic Acids Research, 47(4), 1823-1835, February 28, 2019
Assembly and translocation of a CRISPR-Cas primed acquisition complex
Kaylee E. Dillard, Maxwell W. Brown, Yibei Xiao, Adam Dolan, Erik Hernandez, Samuel Dahlhauser, Yoori Kim, Logan R. Myler, Eric Anslyn, Ailong Ke, and Ilya J. Finkelstein
Cell, 175(4), 934-946, November 1, 2018
Efficient modification of λ-DNA substrates for single-molecule studies
Yoori Kim, Armando de la Torre, Andrew Leal, Ilya Finkelstein
Scientific Reports, 7(1), 2071, December 1, 2017
Single-molecule imaging reveals how Mre11-Rad50-Nbs1 initiates DNA break repair
Logan Myler, Ignacio Gallardo, Michael M. Soniat, Rajashree Deshpande, Xenia Gonzalez, Yoori Kim, Tanya Paull, Ilya Finkelstein
Molecular Cell, 67(5), 891-898, September 7, 2017
Next-Generation DNA Curtains for Single-Molecule Studies of Homologous Recombination
Michael Soniat, Logan Myler, Jeffrey Schaub, Yoori Kim, Ignacio Gallardo, Ilya Finkelstein
Methods in Enzymology, 592, 259-281, 2017
Dynamic DNA binding licenses a repair factor to bypass roadblocks in search of DNA lesions
Maxwell Brown, Yoori Kim, Gregory Williams, John Huck, Jennifer Surtees, Ilya Finkelstein
Nature Communications, 7:10607, February 3, 2016
The Production of High Purity Phycocyanin by Spirulina platensis Using Light-Emitting Diodes Based Two-Stage Cultivation
Sang-Hyo Lee, Ju Eun Lee, Yoori Kim, Seung-Yop Lee
Applied Biochemistry and Biotechnology, 178(2), 382–395, January 1, 2016